rs262294978 SNP Detail

Summary

• ID
  rs262294978
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52247642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATT GTGATCTTGG GGTATTCCAG
  G
  CTTCTTATTT GCTGTCCTCA AAACT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324626576	CHEV_14_52629860	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262294978					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52247642 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6435	CpG island 6435	523 bp distal
D14Mit183	DNA segment, Chr 14, Massachusetts Institute of Technology 183	31 bp proximal
Rr369820	regulatory region 369820	1338 bp downstream
Rr369821	regulatory region 369821	1054 bp downstream
Tssr128467	transcription start site region 128467	1473 bp upstream
Tssr128468	transcription start site region 128468	1292 bp upstream
Tssr128469	transcription start site region 128469	1199 bp upstream
Tssr128470	transcription start site region 128470	981 bp upstream
Tssr128471	transcription start site region 128471	550 bp upstream
Tssr128472	transcription start site region 128472	522 bp upstream
Tssr128473	transcription start site region 128473	663 bp downstream
Tssr128474	transcription start site region 128474	683 bp downstream
Zfp219	zinc finger protein 219	within coordinates