TTTTT GGTTTTTCGA GACAGGGTTT Y TCTGTGTAGT CCTGGCTGTC CTGGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129P2/OlaHsd |
129S1/SvImJ |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
KK/HlJ |
LG/J |
LP/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
ST/bJ |
SWR/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss643151232 | FVB_NJ_12_72421675 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | C | C | C | T | T | C | C | T | C | C | T | T | T | T | T | C | C | C | C | C | C | C | C | C | C | C | C | T | C | T | C | C | C | C | T | C | C | T | C | C | T | C | C |
SNP Consensus Information | ||||||||||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | 129P2/OlaHsd |
129S1/SvImJ |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
KK/HlJ |
LG/J |
LP/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
ST/bJ |
SWR/J |
WSB/EiJ |
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rs262324554 | SNP | C | C | C | T | T | C | C | T | C | C | T | T | T | T | T | C | C | C | C | C | C | C | C | C | C | C | C | T | C | T | C | C | C | C | T | C | C | T | C | C | T | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss643151232 | FVB_NJ_12_72421675 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
Location: Chr12:71367462 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930474H06Rik | RIKEN cDNA 4930474H06 gene | within coordinates | ||||||
Cpgi4722 | CpG island 4722 | 1776 bp distal | ||||||
Dact1 | dishevelled-binding antagonist of beta-catenin 1 | 581 bp downstream | ||||||
Rr267971 | regulatory region 267971 | 1862 bp distal | ||||||
Rr267972 | regulatory region 267972 | 1739 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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