rs262349255 SNP Detail

Summary

• ID
  rs262349255
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26729954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT GTCTTGGTGT TGGGGTGGGG
  M
  TAGGGGAGGG GCTTCCCAAT AATGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325342195	CHEV_17_26647925	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262349255					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26729954 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8811	CpG island 8811	1957 bp distal
Gm56886	predicted gene, 56886	987 bp downstream
Rr339410	regulatory region 339410	1153 bp distal
Rr392454	regulatory region 392454	within coordinates
Rr405113	regulatory region 405113	1875 bp downstream
Rr406958	regulatory region 406958	290 bp distal
Tssr5045	transcription start site region 5045	1512 bp upstream
Tssr5046	transcription start site region 5046	1459 bp upstream
Tssr5047	transcription start site region 5047	1448 bp upstream
Tssr143235	transcription start site region 143235	1272 bp downstream
Tssr143236	transcription start site region 143236	1239 bp downstream
Tssr143237	transcription start site region 143237	1747 bp upstream
Tssr146956	transcription start site region 146956	1481 bp upstream
Tssr146957	transcription start site region 146957	1411 bp upstream