rs262353155 SNP Detail

Summary

• ID
  rs262353155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135659331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAATAATGC AAGGATAACA
  TGAATAGACT TCCCTTCAAG GCTTTCTTCC TGGCACCGTG ACTGTAAATA GCAGACCGTG
  AACATGCATC AGAAGAGTAA GCAGAGAACA CAGGATTAAC ACTGGGGGGG GGGGGGGGGG
  CTCCTCCAGG GTATAAAGGC GCTTGCTGCC AAGCTTGCTG ATCTAAGTTT GATCCCGAAG
  R
  CCTACAAGGG ATGAAACGTG ATGAAACCAT TTCTAGATTT AGCTCAAGAA TAAACTCTTA
  GAAACAAGAG CTGTGGTTTG TGCTGAGAGA TATTTCTATC CAGACCTCCT CTTTTAGGAT
  ATTCTGTCAT GTGTGTCTTT GTATCTATGT GGGCACTTTC CTGGAGGTCA GAGGACAGAT
  TACAGAAGTC GGCTCTCTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697449	CHEV_5_136106347	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262353155					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135659331 () rs orientation: forward

Symbol	Name	Function Class
Gm72236	predicted gene, 72236	1924 bp downstream
Rr399417	regulatory region 399417	1529 bp downstream
Rr622386	regulatory region 622386	1697 bp distal
Rr622387	regulatory region 622387	1091 bp distal
Rr622388	regulatory region 622388	85 bp proximal
Rr622389	regulatory region 622389	321 bp proximal
Rr622390	regulatory region 622390	1739 bp proximal