rs262371420 SNP Detail

Summary

• ID
  rs262371420
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:3251768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgggcatat atccagaagt tattccaact
  ggtaagaagg acaaatgctc cactatgttc atagcagcct tatttataat agccagaagc
  tggaaagaac ccagatgccc ctcaacagag ggatggatac agaaaatgtg atctatttac
  M
  caatggagta ctactcagct attaaaaaga atgaatttat gaaattccta ggcaaatgga
  tagacctgga gggcttcacc ctgagtgagg taacccaata acataggaac ttatacaata
  tgaactcact gataagtgga tagtagccta                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320633049	CHEV_3_3186708	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262371420					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:3251768 () rs orientation: forward

Symbol	Name	Function Class
Gm37338	predicted gene, 37338	1325 bp upstream
Tssr28246	transcription start site region 28246	1216 bp upstream
Tssr28247	transcription start site region 28247	1284 bp upstream
Tssr28248	transcription start site region 28248	1308 bp upstream
Tssr28249	transcription start site region 28249	1349 bp upstream
Tssr28250	transcription start site region 28250	1370 bp upstream
Tssr28251	transcription start site region 28251	1392 bp upstream
Tssr28252	transcription start site region 28252	1404 bp upstream
Tssr28253	transcription start site region 28253	1416 bp upstream