rs262414356 SNP Detail

Summary

• ID
  rs262414356
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58279418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctccctct cactttctca gtcagtctct
  gtgtctttct gtctgtcttc tctgtctccc AGAGGCCTCA CACATGTAAA ACATACATTC
  GTCCACTGCA AAGGTCACAC TTTCCTTTTG AAATGCTCTA GGCACCCATA CTGCCTTGTC
  K
  TCTTCTTCTT TTTTTTTttt tggtttttcg agacagcatt tctctgtata gctctggaca
  tcctggaacc cactttgtag accaggctgg cctcgaacCT GCCTTGGTTT TTAATTTGGA
  AGCTGTGCCA AAGAATTAAt ttcttccttc                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323690076	CHEV_11_58202094	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262414356					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58279418 () rs orientation: forward

Symbol	Name	Function Class
Lypd8	LY6/PLAUR domain containing 8	within coordinates
Tssr3508	transcription start site region 3508	1715 bp downstream
Tssr101739	transcription start site region 101739	1831 bp downstream
Tssr101740	transcription start site region 101740	1786 bp downstream
Tssr101741	transcription start site region 101741	1768 bp downstream
Tssr101742	transcription start site region 101742	1496 bp upstream
Tssr101743	transcription start site region 101743	1565 bp upstream
Tssr101744	transcription start site region 101744	1647 bp upstream
Tssr101745	transcription start site region 101745	1676 bp upstream
Tssr108157	transcription start site region 108157	1788 bp upstream
Tssr108158	transcription start site region 108158	1756 bp upstream
Tssr108159	transcription start site region 108159	1559 bp downstream
Tssr108160	transcription start site region 108160	1572 bp downstream
Tssr108161	transcription start site region 108161	1637 bp downstream
Tssr108162	transcription start site region 108162	1666 bp downstream