rs262462485 SNP Detail

Summary

• ID
  rs262462485
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:99944340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTCGCCT GCAACCTACT
  CCAGGAGATA TCTGGTTTCC CCGCTGACTG TCCTGCAGAA GGTGACATGG AACAATTCAT
  CAGGATGGAG CGTTCAGGCA GACTGGCTGG TGAGTAAGCA CAAAGCTGAC ATCCCGTGTC
  TCTTGCACTG TATCAACTAG CTGGAGTAGA TTTGCCTCTT GAAAAAATAA GAGAAATGAG
  R
  CCCCAGGCAT AACCATGCCC TGTGATTTAC TCAGGCTAGC AGTAGACTTA AGTGATTTCT
  TGGACTACTT GCATGCTTTA ATCCCCCTAA GAAGAAACTG AGATCTTCAT GGACCCTCAA
  ACCTGCCTTT CTTTATCTGG TTTGATTTAA TTCAAAAATA CATTCACTAG GCTTTAGAAC
  AGAACCAAGT TGAAACAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323830637	CHEV_11_99914828	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262462485					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:99944340 () rs orientation: forward

Symbol	Name	Function Class
Gm11571	predicted gene 11571	within coordinates
Tssr104894	transcription start site region 104894	1399 bp downstream
Tssr104895	transcription start site region 104895	1249 bp downstream
Tssr104896	transcription start site region 104896	1222 bp downstream