rs262488322 SNP Detail

Summary

• ID
  rs262488322
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115437395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGCTCTTA CCCGCTCAGC
  CATCTCACCA GCCCCAACCT GTGCGTTCTT TAAATAATTA TTTTGGTTTT TTTAATCATG
  TATGTCTGTG TGCATGAAGG CAGAGATCAG AGGAATAGAT TCCTTAGAGC TGGAGTTCTG
  TTGTGAAGCA ACTGACACTG GCGCTGGAAA TCAAACTCCC GTCCTCTGAA ACAACAATAC
  R
  CTCTTAACCC CTGAGTCACC TCTCCAGACC CTAAAATCTG TGTATTTTAC TGTGTTGGTG
  TGAAGAAGAG GGGACAGTGG TGGAAATCAG GATGGGACAG GAGCTCCGAC CTAAAGATAA
  TAAAGAAGGG GAAACGCTGT CCTGTTGAGA CCCCTTGTGT CTTCAGCTTC TTTGTTTCCA
  GTAAAGATTG ACAATCCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320892536	CHEV_3_115346664	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262488322					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115437395 () rs orientation: forward

Symbol	Name	Function Class
Rr65100	regulatory region 65100	1006 bp proximal
Rr367536	regulatory region 367536	1308 bp downstream
Rr367537	regulatory region 367537	740 bp downstream
Rr397953	regulatory region 397953	746 bp upstream