rs262497405 SNP Detail

Summary

• ID
  rs262497405
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44381359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATTTAAA TTCTGTTCTA
  AATTTTTATT TTTTTGTGTG ATATGGTGTG TGTGTGTGTG TGTGTGTGTG TAAGAGTTGG
  GTTCTCTGGG ACTGGAGTTA TAGATATTTG TAGCTGCCAT GTGGGTTCTG GGAATTGAAC
  TCAGGTCCAG CAGGGGTTAC ATAGTGAGAC TCTGTATCAA ACATAAATGT ATATAAATAA
  R
  TCAATAGAAA ACAGAGCTGT ACACATGGTT CAGTGGGTTA AGAGTGCTTG CTGCACTTTC
  AGAAGACCCG AGTTCAATTC CCAGCACCCA CATGAGGCAG CTCACAATCA CCTGTAACTT
  CAGCTCCGAG GATCTCTGCA AATGCCAGCA TGTACCCACA CTTGCACACA GACACACATA
  TACATCATAA GAAATAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100991	CHEV_4_44394231	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262497405					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44381359 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	595 bp distal
Gm12455	predicted gene 12455	1563 bp upstream
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	442 bp proximal