rs262515879 SNP Detail

Summary

• ID
  rs262515879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:59953864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCCAACA AGACCCAGGT
  ACCCAGGTCT GATTATTTCT CACAGCCGCT AATAAGGCCA CTTGGGTGCC ATAAATAGAC
  ATACTGCAGG AAGGATGTAT TTCCCAGTCA ACCACAGTCC CCTTCATCAG CTTGAAGATG
  GTACTGGCTC CCGGCTGACC TCAGCATCCC CCCCCCTCCC CGTTCTACCC CAAAATGACT
  R
  TTCCCATGAT GCCTGCAAGA TGCCCTGTCA CCACTCCCTG TGACCCCTCT GGGGAGCCAT
  TAGTCTCACA TTCCCACGGG ACTCTGCTTC CCAGCAATGA CCCCTCTTTC CCCAGCTTCC
  AAAGATACTT CACCTTTCAT CTCTTGCCTC CCCACCCTCC CCACCCCCGT TTTCCTCACC
  TGAATCTGAG TCTCTTGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323323897	CHEV_10_59580790	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262515879					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:59953864 () rs orientation: forward

Symbol	Name	Function Class
Gm51801	predicted gene, 51801	within coordinates
Rr219869	regulatory region 219869	137 bp proximal
Rr219870	regulatory region 219870	1137 bp proximal
Spock2	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	within coordinates