TCCAT CGTCCTGAGC CTCGCTTATC Y ACCTTCGCCC CAATGGCGAG GGGCA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss323859193 | CHEV_11_113481748 | CHEVERUD | SCREENING_POP | f | SNP | T | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs262553384 | SNP | T | C |
Location: Chr11:113511260 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi4077 | CpG island 4077 | 465 bp distal | ||||||
Rr459388 | regulatory region 459388 | 948 bp distal | ||||||
Rr459389 | regulatory region 459389 | within coordinates | ||||||
Slc39a11 | solute carrier family 39 (metal ion transporter), member 11 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Sstr2 | somatostatin receptor 2 | Intron | ||||||
Tssr105751 | transcription start site region 105751 | 1088 bp downstream | ||||||
Tssr105752 | transcription start site region 105752 | 1049 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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