rs262605097 SNP Detail

Summary

• ID
  rs262605097
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:58417353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTCACCT ACTCAAACAA
  GGAACAAAAA AATCACCTTT AACTGATCTG TGCACATTGC ATATTCCATA CATTATGTTA
  ATATAGAAAT ATATATTACC TCTAAAAGCT TTACGTTTGC AGAGGGGGAA AAAAAAGCAA
  CCAAGACTAA CCCTGACAGG ATTAGGATTC ACCCTCGGGG ATGTTAAGAT GCTGAGACTG
  C
  TGTCCTAACC CTGCCTCAAC TGCATCAAAA CTGTTTCCGC TAAAGACTTG CTTCGAGGAC
  AACCCACAAC AGCTAGCTCC TCAGTCCAGC CTTTCCGACT GTTGCAGGTG GAGCTTCAGT
  GAAGCCTGCA TTTTCTCAGC AAAGACTGGA CAACAAATGC TAGCTTTCTT AAGACTAACA
  ATTTTTTCTA AATTTCCCTG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324353126	CHEV_13_58370900	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262605097					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:58417353 () rs orientation: forward

Symbol	Name	Function Class
Gkap1	G kinase anchoring protein 1	within coordinates
Rr276751	regulatory region 276751	848 bp proximal
Rr388493	regulatory region 388493	149 bp upstream