rs262619008 SNP Detail

Summary

• ID
  rs262619008
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:48607138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAAATCT CCCCCATGCT
  CTCTTTTCTC AGAGAAAACT AGAATAGAGA AATTCATCAA GGTTTAGTGC CTTGGTTACA
  ATCTCTCTCT CTCTCTGTGT CTCTCTGTAA TTAGAGATGC TTCATTTTTT TTTTTTTTTT
  TTTTTTTTTT TTTTTTTTTT TTTTTTAGGA AGTCTAAGAG ACTTGGGATG TGAGGGGCTC
  C
  CAGGACTCTG TGGAATGACC TTAGCCGCAA TGTCCAACAG TTGAGGGATG GAGCCTAAAG
  AGAACAGTGA TCCCAGTAGA GAGATAGGAT CACCAATATA CCTTCAAAAA TTTTAACCCA
  TAATTTGTAC CTGTATAAAA GAAAGACAGG CACAAATATG GATCAGAGAG TGAGAAAGGC
  TCTCTACCAA ATTGCCCAAT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324029941	CHEV_12_49661342	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262619008					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:48607138 () rs orientation: forward

Symbol	Name	Function Class
Gm1818	predicted gene 1818	470 bp upstream
Gm59684	predicted gene, 59684	375 bp downstream
Rr465734	regulatory region 465734	362 bp distal