rs262630665 SNP Detail

Summary

• ID
  rs262630665
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101944609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGCCTGT TGCTGCTGCT
  GCGTCACATA AATTCCTAAG TTGTGGGACC CTCTCCCAGG GTGTGTTGTT CAACCAGTTC
  CTCAGCAGTG ATGTGACCCT TTGGGTTAGG AACACAGAGC TGATTCCTCA GGGAGTCCTT
  TGTGCAACAG GAGAGCACTG GGCTACTGTG CTCTCACCGG CTCTTTGAGT GATGAGCCAG
  R
  CTCTCTCCAC CCGCCCACCC CCCCCGGGGG GGCATCCCCC TTTTTTGTAG CCAAGAGGTG
  AGGAAACCCT TGGTGCTGCT TGGTGGCAGA TGAACAGGGA GCTACTGACA CATCCCAGGG
  CCAGCGAGCG GGAACGAGCG CGGGGGCGGG AGCGGCGTGT AGTGGCAGAA GGCCGCCGGG
  ATTATGAATG GGGGTGGGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321232349	CHEV_4_101760017	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262630665					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101944609 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14506	CpG island 14506	within coordinates
Pde4b	phosphodiesterase 4B, cAMP specific	131 bp upstream
Rr99646	regulatory region 99646	within coordinates
Tssr38021	transcription start site region 38021	203 bp upstream
Tssr38022	transcription start site region 38022	303 bp upstream