rs262633938 SNP Detail

Summary

• ID
  rs262633938
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142015162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAG TGGGTATGGG AATGAACATT
  R
  GCAAAGGTAA AGGGGGCCAC TGCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471353	CHEV_7_149647330	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262633938					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142015162 () rs orientation: forward

Symbol	Name	Function Class
D430042D18Rik	Riken cDNA D430042D18 gene	701 bp downstream
Lsp1	lymphocyte specific 1	within coordinates
Rr166987	regulatory region 166987	within coordinates
Rr166988	regulatory region 166988	1438 bp proximal
Rr400723	regulatory region 400723	524 bp downstream
Tssr2454	transcription start site region 2454	58 bp downstream
Tssr70170	transcription start site region 70170	593 bp downstream
Tssr70171	transcription start site region 70171	539 bp downstream