rs262672354 SNP Detail

Summary

• ID
  rs262672354
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8056151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTATGCT CAAGGCAAAT ATGGCCTGTC
  TTGTGAGAGA GATGTTACAA CTGGCCAGCT GAGCGGCGAA TCCAACATGA GATTTAACTC
  CACCTACTTC CAGGGCACCA ACCAGATCGT GGGAATGTAC CAGGATGGAG CCCTGTCCAT
  Y
  ACCTCCACTT CTGACCTGCA AGATGGCATA TTCAAGAACA CAGCTTCCTT GAAATATGAA
  AACTATGAGC TGACTCTGAA ATCTGATAGC AGTGGGCAGT ATGAGAACTT CGCTGCTTCC
  AACAAGCTGG ATGTGACCTT CTCTACGCAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323884660	CHEV_12_8012957	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262672354					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8056151 () rs orientation: forward

Symbol	Name	Function Class
Apob	apolipoprotein B	within coordinates
Tssr112626	transcription start site region 112626	1233 bp downstream
Tssr112627	transcription start site region 112627	1163 bp downstream
Tssr112628	transcription start site region 112628	60 bp downstream
Tssr112629	transcription start site region 112629	94 bp upstream
Tssr112630	transcription start site region 112630	233 bp upstream
Tssr112631	transcription start site region 112631	466 bp upstream
Tssr112632	transcription start site region 112632	500 bp upstream
Tssr112633	transcription start site region 112633	565 bp upstream
Tssr112634	transcription start site region 112634	716 bp upstream
Tssr112635	transcription start site region 112635	807 bp upstream
Tssr112636	transcription start site region 112636	1278 bp upstream
Tssr112637	transcription start site region 112637	1351 bp upstream
Tssr112638	transcription start site region 112638	1423 bp upstream
Tssr112639	transcription start site region 112639	1650 bp upstream
Tssr112640	transcription start site region 112640	1703 bp upstream
Tssr112641	transcription start site region 112641	1757 bp upstream
Tssr112642	transcription start site region 112642	1809 bp upstream
Tssr112643	transcription start site region 112643	1916 bp upstream