rs262682375 SNP Detail

Summary

• ID
  rs262682375
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:144132139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACCCATCT TGGTAGAttg aggcggggtc
  ttatgtagtc caggctggcc tcaaacttat tatggagcct gaggataccc ttgaattcct
  gatcttgcct tcaccttcag agtacagaca tggcgtgcCT GGCGTATTTA TCTAGAtttt
  Y
  tttttttttt tttttttttt tttttttttg tgacagtctt ggtatgtagt cctgggtagt
  ctcaaactca cgatcctcct gcctcagttt cctgagtgca gggcctatgg gcatccagcc
  ctttgcttaa ctttTGAAGC AAAACTCCAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321709374	CHEV_5_144956190	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262682375					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144132139 () rs orientation: forward

Symbol	Name	Function Class
Bhlha15	basic helix-loop-helix family, member a15	880 bp downstream
Rr624360	regulatory region 624360	591 bp distal
Tecpr1	tectonin beta-propeller repeat containing 1	mRNA-UTR