rs262769002 SNP Detail

Summary

• ID
  rs262769002
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120087495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCATTGTT GACTAGTTTT
  CTCAGACTGA CCAGCTAGCT TAGAATAAAG ACAATGTTGC AGCGTCTTCC AAGAAATCCT
  CATATTTTTC TGTATCTCTG CAAGGTGCTC AGTTATTGGC AAACATGATA ATCTGATTAT
  TAAAGTCATT TCTGACCAGG CACTTGGCTC GATGGTAGTA ATCCGCACAG GGAGTCTATG
  Y
  GGTGTGTGGT AGAGACGCTC TGTTCTGTTG TGTGTTCATC TGTGTTCTTC TCATTCTTTG
  CCAGTTGAGA CCATAGATCT AGGTAGAGAT AGTGAGGCTG GCATGCCCAG CCAATCACCA
  TGCTGGTAGC TCAGCTGCAT GACCTCAAGT TGTTAGACTA TGGCTGTGTG ACAAGGATAA
  GAAAATGAAT GATGTCAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323226213	CHEV_9_120167547	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262769002					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120087495 () rs orientation: forward

Symbol	Name	Function Class
Gm38642	predicted gene, 38642	1383 bp downstream
Gm47059	predicted gene, 47059	within coordinates