rs262783153 SNP Detail

Summary

• ID
  rs262783153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:119802840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGCCACG GCCACTGCCA
  AGTCCTCCTC TACAGAGGCG TCATCGATGG CATCCGCTGT GAGAGGCACG CCTGCCCCTG
  ACTCCGGAAC TCCAGCCACT GAAAACTATA AGTACAGAAA GACGGTGTGA GAGAGAGAGA
  GATTTAGCTC TCCCAGAGAG TGGGGTGCTG TCTGTGGGGG AGGGGTACAC ACTGTGCTCC
  R
  CAGCTACAAG GATCTCTTAC TCAAACCCCG ATGTACTGGC AGTGTCAGAT CAGTCTAGCC
  GGCTGATCGG ATTCAGCTAG GAAGATTCAA GCATTATTTA TGCCCAGGGC CTAGCCTGTG
  GTCTGAAGCC GACTACTTTC ATTTGGGAAA GGGCCATGGC CTCAAGCTTG CGGAGGATGA
  CCTCGAATCC CTGATTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223783	CHEV_9_119882892	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262783153					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119802840 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22487	CpG island 22487	345 bp proximal
Csrnp1	cysteine-serine-rich nuclear protein 1	Intron
Rr688590	regulatory region 688590	284 bp proximal
Rr688591	regulatory region 688591	983 bp proximal
Rr688592	regulatory region 688592	1027 bp proximal