rs262943087 SNP Detail

Summary

• ID
  rs262943087
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:112685056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccaggacag ccaaggctac acagagaaat
  cctgtcttga aaaccaataa ataaataaat aaatcttaaa agaaaatcaa aTATATATAT
  ATATGGGttt ttttttcccc cagcacatag aagcccctct ctccctcctg tttctgtggc
  Y
  ctgaccactc cagggcctct agatgagtag acttgctaag cctatgtgtt tgtttgtttc
  tctgttttca agttcaccca tgctgtagca cttgccaaaa cttctttcct ttttgagatt
  aatcataggt taccacacat ggacacatct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324170467	CHEV_12_113956833	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262943087					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112685056 () rs orientation: forward

Symbol	Name	Function Class
Gm46382	predicted gene, 46382	Intron
Gm59466	predicted gene, 59466	within coordinates
Rr473580	regulatory region 473580	1774 bp distal
Rr473581	regulatory region 473581	1194 bp distal
Rr473582	regulatory region 473582	1283 bp distal
Tssr115398	transcription start site region 115398	615 bp upstream