rs262970381 SNP Detail

Summary

• ID
  rs262970381
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142619801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTTGGCA CATAGCTGTT
  GGTCATGTGG GCTAGGCCTG GGCTTGCTGG TCAAGGCTCT GACCTCTTCT TTCCCCTAGT
  TCTTCACCTG CCTTGTGATC CTGTTTGCCT GTGAGGTGGC TGCAGGCATC TGGGGCTTCG
  TAAACAAAGA CCAGGTAAGC CTAGGTTCAC CGAGTGGGAG ATATGCCCTC TGCCCTCCAA
  S
  AGATGTGGGT TGCTCTGAGC CCATAGTTAT AGGGTGCTTT TTGAATTTCT TGGACCTGCT
  GCTTGGGTGG GGGCAGGGTC TTGGGAGCTC AGTGGAAGAG GTGGCATCAG GCTGAGCCCA
  TCGGGAAGTT GAGTGCTCTT GGGCGTAGCC CCGACACTGT ATGTGACTAT GATTCTCCCC
  CAGATCGCCA AGGATGTGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322473969	CHEV_7_150251969	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs262970381					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142619801 () rs orientation: forward

Symbol	Name	Function Class
Cd81	CD81 antigen	within coordinates
Tssr70273	transcription start site region 70273	1105 bp downstream
Tssr70274	transcription start site region 70274	1087 bp downstream
Tssr70275	transcription start site region 70275	301 bp downstream
Tssr70276	transcription start site region 70276	270 bp downstream
Tssr70277	transcription start site region 70277	115 bp downstream
Tssr70278	transcription start site region 70278	666 bp upstream
Tssr70279	transcription start site region 70279	1301 bp upstream
Tssr70280	transcription start site region 70280	1337 bp upstream
Tssr70281	transcription start site region 70281	1471 bp upstream