rs263051659 SNP Detail

Summary

• ID
  rs263051659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:109738730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATGCTTAT ATTTGAAAAA
  TGCACAAGGT AAGTGCTATT CCAAAAATAG TTGCCCCAGC AAACTCTATT GCTTAAAACT
  TGCAATTAAG TTTACTGACA GAAAGCCCAG TGTACAGAAT TACATACTAT AGGAACAGCA
  GAACAAACAG GAGAAGAAGA GAAAAACTAG GTCAGAGGTC AGAAAACACA CCTACAGGCA
  Y
  GGTACGCGGT AGTCAGCGTT CCTCAGAGTC TGAGGTTGTT GCACGGACAG TGGACACACA
  GAAATCCTGG GAGCAGATGA TTTCTCATGC AAGCAGGACA GCAGACAGAC AAATGTGAAA
  GCCATCATGC AAAGGCAGTT AACTTTGAAA ATGGCGCCCA GCGCTGAGAT TCCGAATAAA
  TCGGACTCTT ACCATCTGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323458392	CHEV_10_109339925	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263051659					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:109738730 () rs orientation: forward

Symbol	Name	Function Class
Nav3	neuron navigator 3	within coordinates
Rr224236	regulatory region 224236	870 bp proximal
Tssr99236	transcription start site region 99236	945 bp downstream
Tssr99237	transcription start site region 99237	961 bp downstream
Tssr99238	transcription start site region 99238	983 bp downstream
Tssr99239	transcription start site region 99239	1006 bp downstream
Tssr99240	transcription start site region 99240	1042 bp downstream
Tssr99241	transcription start site region 99241	1083 bp downstream
Tssr99242	transcription start site region 99242	1143 bp downstream