rs263064304 SNP Detail

Summary

• ID
  rs263064304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117112025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAGAAGGC GGTGGACAAG
  ATATTTTCAA AACGCTAAGA CAGGTGGTGC TTAACAATAT CAAAGACTGG ACTGTAATCA
  AATCTCTTCT GGTACCGAAA TCAGCATTTG AATATTGTAG CGACAATCTT AACTCAGTGC
  ACCAAAACAT CACAGCCACA CAACTCTGTG TGTTTATGGG CACAAGGTCA TGTGTACTGT
  R
  GTGCTCATGG AAGTCAGAGG AAAACTTGCT GGAGTGCATT TCCTCCTTGC ATCTTGTGCA
  CTCCCGGTTT GTACTCAGGT CGCCATGCTT CCCACTCCCT GATTTCTGAC TGTTCAGTTT
  CTTAAGATCT TTGGAAGCTC TTAGCTATGG TGGCTGCTGG GACTTTTGCA AAGGCTGTCA
  TTCCTCTAGG CTCAGAGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323495152	CHEV_10_116713176	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263064304					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117112025 () rs orientation: forward

Symbol	Name	Function Class
Gm67237	predicted gene, 67237	within coordinates
Lyz2	lysozyme 2	1421 bp downstream
Rr439488	regulatory region 439488	222 bp distal
Tssr95904	transcription start site region 95904	1209 bp upstream
Tssr95905	transcription start site region 95905	1265 bp upstream
Tssr95906	transcription start site region 95906	1327 bp upstream
Tssr95907	transcription start site region 95907	1344 bp upstream
Tssr95908	transcription start site region 95908	1520 bp upstream
Tssr95909	transcription start site region 95909	1596 bp upstream
Tssr95910	transcription start site region 95910	1731 bp upstream
Tssr95911	transcription start site region 95911	1861 bp upstream
Tssr95912	transcription start site region 95912	1956 bp upstream
Tssr99410	transcription start site region 99410	1310 bp downstream
Tssr99411	transcription start site region 99411	1362 bp downstream
Tssr99412	transcription start site region 99412	1483 bp downstream
Tssr99413	transcription start site region 99413	1544 bp downstream
Tssr99414	transcription start site region 99414	1633 bp downstream
Tssr99415	transcription start site region 99415	1716 bp downstream
Tssr99416	transcription start site region 99416	1766 bp downstream
Tssr99417	transcription start site region 99417	1878 bp downstream
Tssr99418	transcription start site region 99418	1892 bp downstream
Tssr99419	transcription start site region 99419	1907 bp downstream
Tssr99420	transcription start site region 99420	1979 bp downstream