rs263089331 SNP Detail

Summary

• ID
  rs263089331
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67187333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgggtggc taggggagtg ggggtgggtg
  ggtagggggg acttttggta tagcattgga aatgtaaatg agctaaatac ttaataaaaa
  atggaaaaat aaaAAAAAAG AAATCTTTAA ATAGAAATGG AAACTTCGAG CAATTATAGT
  R
  TTAGGAACTA TCATAAACAT TTGAATGAAT TAAAAATGAT GTGTGGAAAT GTATTTCATT
  TACTTTTTAC TTTTCTTTTT TTTTAATCCT ATTTGACAAC CAGTATTGAT AAAATGATTG
  AAATCAAAAC TAAACCATAT CATTAAATCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719448	CHEV_11_67110009	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263089331					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67187333 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3068	CpG island 3068	1964 bp proximal
Myh8	myosin, heavy polypeptide 8, skeletal muscle, perinatal	within coordinates
Tssr3531	transcription start site region 3531	1989 bp downstream
Tssr102226	transcription start site region 102226	1943 bp downstream
Tssr102227	transcription start site region 102227	1958 bp upstream
Tssr108547	transcription start site region 108547	1236 bp downstream
Tssr108548	transcription start site region 108548	1989 bp downstream