rs263099155 SNP Detail

Summary

• ID
  rs263099155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:62488880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAACAAATG TGGCCTTTCT AAGTCCTAAT
  GGCCTGAACT AATTCTCTTA TCAAGTGGGG AAGGAGATTG GAGATCTACA CATGAGTAAC
  TTGCCCAAGG AGTGAAGGAC TTGGTCGATA TTAGCTTAAT TGATCAGGAA ACATGGGAAC
  R
  GGAACTATAA TTTTAATTTA AAACTCAAAA GATTTATGTC TGATCGTGAG ATTTGGAACC
  AAGGGGAATT AAAACAACAt atcatttatt tttctcactg ctgggacaaa atacctgaga
  agagacttaa gcgttttatt ttgggtcatt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323331637	CHEV_10_62115849	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263099155					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:62488880 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1632	CpG island 1632	1188 bp distal
Ddx50	DExD box helicase 50	1883 bp upstream
Gm66017	predicted gene, 66017	651 bp downstream
Rr369004	regulatory region 369004	1616 bp downstream
Rr432661	regulatory region 432661	1894 bp distal
Rr432662	regulatory region 432662	1436 bp distal
Rr432663	regulatory region 432663	713 bp distal
Tssr93725	transcription start site region 93725	1424 bp downstream
Tssr93726	transcription start site region 93726	1395 bp downstream
Tssr93727	transcription start site region 93727	1375 bp downstream
Tssr97868	transcription start site region 97868	1909 bp upstream
Tssr97869	transcription start site region 97869	1867 bp upstream