rs263127277 SNP Detail

Summary

• ID
  rs263127277
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:23346689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGCTCAGT CATCCGATCA TGCAAACTTA
  TAGTGGTTAT GACAGTGTAA ATGGGAACTA CATGCCAAGT CACCAAATCC CAGCATAAGA
  TTGGGGAGTT GGCCATGAAA TTTCAACCTC AAACATGGAG CATGGtaaaa aaaaaaaaaa
  W
  ttttttttGC ATCTAAGGTT TTTATTAGCA ATATATAATA ATGAATTTCA TTAAAGCTTT
  ATTTTTTAAA TGTTAAtttt ttaattagat attttcttca tttacatttc aaatgctatc
  ccttttccta gtttactctc caaaagtccc                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319662191	CHEV_1_23314447	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263127277					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:23346689 () rs orientation: forward

Symbol	Name	Function Class
Gm70599	predicted gene, 70599	1303 bp downstream
Rr15559	regulatory region 15559	1489 bp distal
Rr33139	regulatory region 33139	1089 bp distal
Rr370991	regulatory region 370991	within coordinates