rs263133079 SNP Detail

Summary

• ID
  rs263133079
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127398467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTG GGGCTGTGGC TTACACTCCC
  M
  CCTCCTGCAG CCCAACTGCT ATGCG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322451573	CHEV_7_134942809	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263133079					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127398467 () rs orientation: forward

Symbol	Name	Function Class
9430064I24Rik	RIKEN cDNA 9430064I24 gene	799 bp downstream
Cpgi19768	CpG island 19768	14 bp distal
Gm49388	predicted gene, 49388	within coordinates
Hsd3b7	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	1363 bp upstream
Rr655897	regulatory region 655897	819 bp proximal
Rr655898	regulatory region 655898	1209 bp proximal
Setd1a	SET domain containing 1A	within coordinates
Tssr69292	transcription start site region 69292	1313 bp upstream
Tssr69293	transcription start site region 69293	1328 bp upstream
Tssr69294	transcription start site region 69294	1416 bp upstream
Tssr69295	transcription start site region 69295	1549 bp upstream