rs263134787 SNP Detail

Summary

• ID
  rs263134787
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105287785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTGTGGC TCACTCCTCC
  CCCCCACCCC CCCAAACACA CGAAATGACC TCTCTGAAGA AGGACTATCT AGACAGACAA
  CTGCATTCTT CTGGTCACTA GGGGGAACAA GGACTCATGT CCTGACAACC AAATCAATTC
  AATGTATGTA TCTGGCATTC TTGGAGTAGG GTAGGAGTGT TGTTGGTGTA CGAGATAAGC
  R
  GGAATAGAAG CAAACATGAC ATGTGCGATT GGCAGGATCA AAGATGGTGA ACACAGAAAA
  ACAGAGAAGT TGGCTTATAT TTCTAGGTAG AATTCTAGCC AGTAAAAGAG TCTAAAATGA
  AACTCTGAGA AGCCTCACAA AGCTCCAAAC TGGCCTTAAG CTCCTGAGTG CTCATAACCT
  TAAGGTCTTA ACTTGGCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370111	CHEV_7_112787092	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263134787					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105287785 () rs orientation: forward

Symbol	Name	Function Class
Arfip2	ARF interacting protein 2	within coordinates
Cpgi19541	CpG island 19541	1506 bp proximal
Gm45799	predicted gene 45799	1974 bp upstream
Rr400513	regulatory region 400513	1670 bp upstream
Rr652793	regulatory region 652793	988 bp proximal
Rr652794	regulatory region 652794	1489 bp proximal
Rr652795	regulatory region 652795	1728 bp proximal
Timm10b	translocase of inner mitochondrial membrane 10B	1478 bp upstream
Tssr2358	transcription start site region 2358	1838 bp upstream
Tssr68382	transcription start site region 68382	1885 bp upstream
Tssr68383	transcription start site region 68383	1944 bp upstream
Tssr74083	transcription start site region 74083	1739 bp downstream