rs263217428 SNP Detail

Summary

• ID
  rs263217428
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:92584123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATAGACT GAGAACCACT
  GCTTTAGATC AAGGGTTCAG AAGTCTAAAA AAGGCCAGAC AGGTCATATA GTGTTTATCA
  TAACTACTCA ACTTTACTGC TACAACATGT AAGCAGAAAC AAACCATATG GGAGGGATGT
  TTCAGTAGAG CTTTATTTAG AAGAAAAAAA TAGCATTGAG AGACTTGGTA GATAGCTCAG
  K
  CAATGAAGTA TTTGCATCAT TGTATACATG GGAACAGATG TTTGAGCACC AGAACCCATG
  TGAAAACATT CAGGTTTAGT AGTTCATACT TTAAATCCCA GAGCTGGGGA GATAGAAACA
  GATACTAACT GGCCAACAAG CATAGCTTAA AACCAGGGCA GATGGCTGCT GAGAAACAAC
  CTCTGAAGTT GACCTTTGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321853075	CHEV_6_92557136	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263217428					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:92584123 () rs orientation: forward

Symbol	Name	Function Class
D6Mit284	DNA segment, Chr 6, Massachusetts Institute of Technology 284	164 bp proximal
Prickle2	prickle planar cell polarity protein 2	within coordinates