rs263279083 SNP Detail

Summary

• ID
  rs263279083
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:172304610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA CCCTGCAACC ACAATTTATG
  Y
  GGTTGTTTTA TTTGATTTTG CTTAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320125602	CHEV_1_174407174	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263279083					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172304610 () rs orientation: forward

Symbol	Name	Function Class
Gm70813	predicted gene, 70813	1519 bp downstream
Gm70814	predicted gene, 70814	1412 bp upstream
Rr423578	regulatory region 423578	1675 bp distal
Slamf9	SLAM family member 9	Intron
Tssr10198	transcription start site region 10198	1659 bp downstream
Tssr10199	transcription start site region 10199	1631 bp downstream
Tssr10200	transcription start site region 10200	1609 bp downstream
Tssr15219	transcription start site region 15219	1843 bp upstream