rs263286817 SNP Detail

Summary

• ID
  rs263286817
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110678945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAATCATT ATTTTTTGAC
  CCAATCCCCC CATGTTCTCT AATTTATTCC TGAACTTAAG ACTTGCCTTG GAGTGTGGCT
  GACATATCAA CTGATACTCT CCGGTGGGGG GGGGGGGGGA TCCCTCTCCC AGCAGCATGT
  ATTTGCTAGT AGCTTCTTGG CTAGGAGTAG GGCTTTTGTC TGGCTTGAGC TTATGCAAAT
  Y
  TTGTGCATGG TATTATAGAA GTGTTCAGTT TTCATCCAGA GATGCTGGAA TCACTTCTCA
  GTTACAACAT CTGAATTGTA TTTGGGCTTT CCCGCTGTTT CACAAGAAAC TTCTCTAAAT
  ACTCAAGAGC AGTAGGTTTT CATTATATGG AAGTGACCAT GAGTTAAGAT GGTTATATTA
  CCCATGTCAC TGAGTTACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322401263	CHEV_7_118223252	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263286817					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110678945 () rs orientation: forward

Symbol	Name	Function Class
Eif4g2	eukaryotic translation initiation factor 4, gamma 2	within coordinates
Rr166519	regulatory region 166519	55 bp proximal
Rr166520	regulatory region 166520	455 bp proximal
Rr381309	regulatory region 381309	1362 bp upstream
Tssr2372	transcription start site region 2372	579 bp downstream
Tssr68538	transcription start site region 68538	437 bp upstream
Tssr74291	transcription start site region 74291	1599 bp upstream
Tssr74292	transcription start site region 74292	1183 bp upstream
Tssr74293	transcription start site region 74293	1170 bp upstream
Tssr74294	transcription start site region 74294	401 bp upstream
Tssr74295	transcription start site region 74295	551 bp downstream
Tssr74296	transcription start site region 74296	1193 bp downstream
Tssr74297	transcription start site region 74297	1858 bp downstream