rs263292483 SNP Detail

Summary

• ID
  rs263292483
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:95240901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaactttct ctcttccata agttcaggga
  tagttttgca gcttgaggca gcccatagca aaaactagtt aacaggggca caattttctt
  gttggtttta tttcaaaagg atgactgtag gtctctggaa attgacaaga gaggttttta
  M
  aaatatttac actttaaagg gggaaaacct gaataaacaa ctttacattt tccaaagaaa
  gggattccaa gaatagtcga tacccttaca gctagaaaaa gctctcttta aagtttgtga
  tcctcctgag ggaaCTGAGA GGAAGTGTTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319848316	CHEV_1_97209753	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263292483					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:95240901 () rs orientation: forward

Symbol	Name	Function Class
Cpgi614	CpG island 614	252 bp proximal
Fam174a	family with sequence similarity 174, member A	452 bp upstream
Rr29863	regulatory region 29863	within coordinates
Rr396183	regulatory region 396183	185 bp upstream
Tssr8214	transcription start site region 8214	431 bp upstream
Tssr8215	transcription start site region 8215	502 bp upstream
Tssr8216	transcription start site region 8216	911 bp upstream
Tssr8217	transcription start site region 8217	930 bp upstream
Tssr8218	transcription start site region 8218	948 bp upstream
Tssr8219	transcription start site region 8219	974 bp upstream
Tssr13058	transcription start site region 13058	879 bp downstream