rs263314323 SNP Detail

Summary

• ID
  rs263314323
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:86988794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gagagagaa agagagagAC AGACTCCTAG
  TTTCCTGGCT TCCACAAGTG CTCCAAGGTA AGCATGCATA ACTAAAGAAT CAAAGCTAAG
  TAAgggctgg agagatggtt cagtggttaa gagcaatgac tgctcttcca aaggtcctga
  R
  ttcagttccc acatggtggc tcacaaccat ctgtactgag atctggtgcc ctcttctggc
  ctccaggtat acatgcagga gaaatgctgt atacatgata aataaatatt tacaaaaaaa
  gaaTCAAAGC TAAGAGCCAT ATGTAAGGAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319828972	CHEV_1_88957647	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263314323					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:86988794 () rs orientation: forward

Symbol	Name	Function Class
Gm28375	predicted gene 28375	within coordinates
Rr17956	regulatory region 17956	within coordinates
Rr36781	regulatory region 36781	938 bp distal
Rr36782	regulatory region 36782	within coordinates
Rr371660	regulatory region 371660	1157 bp downstream