rs263377920 SNP Detail

Summary

• ID
  rs263377920
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:66962669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAT GTGTATGGAC TGAATTCTGG
  W
  CCTCTGGAAG AGCAGTATGC AAGCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322686804	CHEV_8_69033916	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263377920					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:66962669 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20395	CpG island 20395	1594 bp proximal
Gm63911	predicted gene, 63911	within coordinates
Tktl2	transketolase-like 2	1739 bp upstream
Tssr77575	transcription start site region 77575	1715 bp upstream
Tssr77576	transcription start site region 77576	1734 bp upstream