rs263377944 SNP Detail

Summary

• ID
  rs263377944
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53933718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGTATCTC CATAAATACT CTACAAATGG
  GACACAGTCA TTGCCTAATA ATTCTTCGCT CCTTCAGAGT TAAACTGTAT GTATTTACTA
  ACTGTGCATA TACATATGCC ATGTATTTAC TATGCATATA CATATCATTT AGGCATAATt
  W
  tatatatata tatatacata tatatatata tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
  tgtgtgtgtg tgtgtgtgtg tgtAAGGTAC TGTGCCAGTG GTTGCATCTC TCTTGTTTAC
  TACAGACTCC CATATGCCTT TGAGTGGCTT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323306668	CHEV_10_53777428	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263377944					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53933718 () rs orientation: forward

Symbol	Name	Function Class
Man1a	mannosidase 1, alpha	within coordinates
Rr215194	regulatory region 215194	1883 bp proximal
Rr219710	regulatory region 219710	1918 bp distal
Rr222944	regulatory region 222944	283 bp distal
Rr227916	regulatory region 227916	884 bp proximal