rs263383537 SNP Detail

Summary

• ID
  rs263383537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185046290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGAAGTCT GAGGGTGTAG
  CTCAGTGGTA GAGTGTGTGT TGCTGAAAAT TTGGGGTATG TCACAGTGGT CGAGTTTGTG
  TTGGTGAAGT GTGGGGATAC AGCTCAGTGG TGGAATGTGA GTTGCTGAAG TCTGGGATAC
  GACTCAGTGA TACAGTGTGT ATTCACGTCT GAGAGGGCCT GAGTTCAATC AATCCCCTGC
  R
  CACAAAACAA ATAAAAGCCA AATCTGTTTT ACTTCTTAAT TTTAATAACA TATACTCATC
  CTACCGCACT CACTTCAAGG CAATGCCCTC AAAGTCTTGC ATTCTGATAG CTGAGGACTA
  AGAAACAACT GGCTTTAAGT TTACTTGTGT GAATTTATCT CAACTATAAT CATTTCATTT
  TCAACAGATG TATTAAGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320174693	CHEV_1_187137972	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263383537					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185046290 () rs orientation: forward

Symbol	Name	Function Class
2010103J01Rik	RIKEN cDNA 2010103J01 gene	294 bp downstream
Iars2	isoleucine-tRNA synthetase 2, mitochondrial	within coordinates
Mir194-1	microRNA 194-1	708 bp downstream
Mir215	microRNA 215	401 bp downstream
Mirc38	microRNA cluster 38, including Mir194-1 through Mir215	401 bp distal
Rr425363	regulatory region 425363	1896 bp distal
Tssr10600	transcription start site region 10600	1893 bp downstream
Tssr10601	transcription start site region 10601	419 bp downstream