rs263383537 SNP Detail

Summary

• ID
  rs263383537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:185046290 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGAAGTCT GAGGGTGTAG
  CTCAGTGGTA GAGTGTGTGT TGCTGAAAAT TTGGGGTATG TCACAGTGGT CGAGTTTGTG
  TTGGTGAAGT GTGGGGATAC AGCTCAGTGG TGGAATGTGA GTTGCTGAAG TCTGGGATAC
  GACTCAGTGA TACAGTGTGT ATTCACGTCT GAGAGGGCCT GAGTTCAATC AATCCCCTGC
  R
  CACAAAACAA ATAAAAGCCA AATCTGTTTT ACTTCTTAAT TTTAATAACA TATACTCATC
  CTACCGCACT CACTTCAAGG CAATGCCCTC AAAGTCTTGC ATTCTGATAG CTGAGGACTA
  AGAAACAACT GGCTTTAAGT TTACTTGTGT GAATTTATCT CAACTATAAT CATTTCATTT
  TCAACAGATG TATTAAGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320174693	CHEV_1_187137972	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263383537					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185046290 () rs orientation: forward

Symbol	Name	Function Class
2010103J01Rik	RIKEN cDNA 2010103J01 gene	294 bp downstream
Iars2	isoleucine-tRNA synthetase 2, mitochondrial	Intron
Mir194-1	microRNA 194-1	708 bp downstream
Mir215	microRNA 215	401 bp downstream
Rr425363	regulatory region 425363	1896 bp distal
Tssr10600	transcription start site region 10600	1893 bp downstream
Tssr10601	transcription start site region 10601	419 bp downstream