rs263453052 SNP Detail

Summary

• ID
  rs263453052
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44127482 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCC CATTCTCACC ATCTCTTCCT
  R
  CTCTTTCCTC TATCTTTCCT GTACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322198925	CHEV_7_51733428	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263453052					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44127482 () rs orientation: forward

Symbol	Name	Function Class
Tssr2222	transcription start site region 2222	1704 bp downstream
Tssr2223	transcription start site region 2223	1525 bp downstream
Tssr2224	transcription start site region 2224	679 bp downstream
Tssr2225	transcription start site region 2225	639 bp downstream
Tssr2226	transcription start site region 2226	113 bp downstream
Tssr2227	transcription start site region 2227	953 bp upstream
Tssr66204	transcription start site region 66204	1951 bp downstream
Tssr66205	transcription start site region 66205	1927 bp downstream
Tssr66206	transcription start site region 66206	1914 bp downstream
Tssr66207	transcription start site region 66207	1894 bp downstream
Tssr66208	transcription start site region 66208	1880 bp downstream
Tssr66209	transcription start site region 66209	1849 bp downstream
Tssr66210	transcription start site region 66210	1816 bp downstream
Tssr66211	transcription start site region 66211	1776 bp downstream
Tssr66212	transcription start site region 66212	1733 bp downstream
Tssr66213	transcription start site region 66213	1718 bp downstream
Tssr66214	transcription start site region 66214	1686 bp downstream
Tssr66215	transcription start site region 66215	1656 bp downstream
Tssr66216	transcription start site region 66216	1609 bp downstream
Tssr66217	transcription start site region 66217	1537 bp downstream
Tssr66218	transcription start site region 66218	1483 bp downstream
Tssr66219	transcription start site region 66219	1441 bp downstream
Tssr66220	transcription start site region 66220	1407 bp downstream
Tssr66221	transcription start site region 66221	1388 bp downstream
Tssr66222	transcription start site region 66222	1335 bp downstream
Tssr66223	transcription start site region 66223	1268 bp downstream
Tssr66224	transcription start site region 66224	1245 bp downstream
Tssr66225	transcription start site region 66225	1225 bp downstream
Tssr66226	transcription start site region 66226	1212 bp downstream
Tssr66227	transcription start site region 66227	1171 bp downstream
Tssr66228	transcription start site region 66228	1168 bp downstream
Tssr66229	transcription start site region 66229	1155 bp downstream
Tssr66230	transcription start site region 66230	1135 bp downstream
Tssr66231	transcription start site region 66231	1100 bp downstream
Tssr66232	transcription start site region 66232	1088 bp downstream
Tssr66233	transcription start site region 66233	1066 bp downstream
Tssr66234	transcription start site region 66234	1036 bp downstream
Tssr66235	transcription start site region 66235	1016 bp downstream
Tssr66236	transcription start site region 66236	989 bp downstream
Tssr66237	transcription start site region 66237	968 bp downstream
Tssr66238	transcription start site region 66238	949 bp downstream
Tssr66239	transcription start site region 66239	898 bp downstream
Tssr66240	transcription start site region 66240	817 bp downstream
Tssr66241	transcription start site region 66241	805 bp downstream
Tssr66242	transcription start site region 66242	725 bp downstream
Tssr66243	transcription start site region 66243	711 bp downstream
Tssr66244	transcription start site region 66244	660 bp downstream
Tssr66245	transcription start site region 66245	598 bp downstream
Tssr66246	transcription start site region 66246	570 bp downstream
Tssr66247	transcription start site region 66247	523 bp downstream
Tssr66248	transcription start site region 66248	482 bp downstream
Tssr66249	transcription start site region 66249	459 bp downstream
Tssr66250	transcription start site region 66250	440 bp downstream
Tssr66251	transcription start site region 66251	415 bp downstream
Tssr66252	transcription start site region 66252	384 bp downstream
Tssr66253	transcription start site region 66253	356 bp downstream
Tssr66254	transcription start site region 66254	308 bp downstream
Tssr66255	transcription start site region 66255	281 bp downstream
Tssr66256	transcription start site region 66256	232 bp downstream
Tssr66257	transcription start site region 66257	221 bp downstream
Tssr66258	transcription start site region 66258	178 bp downstream
Tssr66259	transcription start site region 66259	142 bp downstream
Tssr66260	transcription start site region 66260	35 bp downstream
Tssr66261	transcription start site region 66261	14 bp downstream
Tssr66262	transcription start site region 66262	7 bp downstream
Tssr66263	transcription start site region 66263	within coordinates
Tssr66264	transcription start site region 66264	6 bp upstream
Tssr66265	transcription start site region 66265	35 bp upstream
Tssr66266	transcription start site region 66266	78 bp upstream
Tssr66267	transcription start site region 66267	106 bp upstream
Tssr66268	transcription start site region 66268	135 bp upstream
Tssr66269	transcription start site region 66269	155 bp upstream
Tssr66270	transcription start site region 66270	206 bp upstream
Tssr66271	transcription start site region 66271	224 bp upstream
Tssr66272	transcription start site region 66272	290 bp upstream
Tssr66273	transcription start site region 66273	302 bp upstream
Tssr66274	transcription start site region 66274	317 bp upstream
Tssr66275	transcription start site region 66275	325 bp upstream
Tssr66276	transcription start site region 66276	354 bp upstream
Tssr66277	transcription start site region 66277	362 bp upstream
Tssr66278	transcription start site region 66278	394 bp upstream
Tssr66279	transcription start site region 66279	441 bp upstream
Tssr66280	transcription start site region 66280	480 bp upstream
Tssr66281	transcription start site region 66281	511 bp upstream
Tssr66282	transcription start site region 66282	537 bp upstream
Tssr66283	transcription start site region 66283	551 bp upstream
Tssr66284	transcription start site region 66284	568 bp upstream
Tssr66285	transcription start site region 66285	583 bp upstream
Tssr66286	transcription start site region 66286	620 bp upstream
Tssr66287	transcription start site region 66287	638 bp upstream
Tssr66288	transcription start site region 66288	674 bp upstream
Tssr66289	transcription start site region 66289	722 bp upstream
Tssr66290	transcription start site region 66290	783 bp upstream
Tssr66291	transcription start site region 66291	812 bp upstream
Tssr66292	transcription start site region 66292	850 bp upstream
Tssr66293	transcription start site region 66293	868 bp upstream
Tssr66294	transcription start site region 66294	889 bp upstream
Tssr66295	transcription start site region 66295	1174 bp upstream
Tssr66296	transcription start site region 66296	1307 bp upstream
Tssr66297	transcription start site region 66297	1350 bp upstream
Tssr66298	transcription start site region 66298	1375 bp upstream
Tssr66299	transcription start site region 66299	1444 bp upstream
Tssr66300	transcription start site region 66300	1451 bp upstream
Tssr66301	transcription start site region 66301	1475 bp upstream
Tssr66302	transcription start site region 66302	1489 bp upstream
Tssr66303	transcription start site region 66303	1530 bp upstream
Tssr66304	transcription start site region 66304	1538 bp upstream
Tssr66305	transcription start site region 66305	1548 bp upstream
Tssr66306	transcription start site region 66306	1582 bp upstream
Tssr66307	transcription start site region 66307	1639 bp upstream
Tssr66308	transcription start site region 66308	1692 bp upstream
Tssr66309	transcription start site region 66309	1713 bp upstream
Tssr66310	transcription start site region 66310	1751 bp upstream
Tssr66311	transcription start site region 66311	1828 bp upstream
Tssr66312	transcription start site region 66312	1844 bp upstream
Tssr66313	transcription start site region 66313	1865 bp upstream
Tssr66314	transcription start site region 66314	1873 bp upstream
Tssr66315	transcription start site region 66315	1893 bp upstream
Tssr66316	transcription start site region 66316	1952 bp upstream
Tssr66317	transcription start site region 66317	1964 bp upstream
Tssr72199	transcription start site region 72199	575 bp upstream
Tssr72200	transcription start site region 72200	371 bp downstream
Tssr72201	transcription start site region 72201	872 bp downstream
Tssr72202	transcription start site region 72202	1735 bp downstream