rs263458256 SNP Detail

Summary

• ID
  rs263458256
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:154033027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGGGTTTT CTAGAATCTA TGCTGCGGTG GCACTGTCAG
  GTGGCACTCT GGCGCCATCC AGTGCCTTCC TAGTCTCTCC GTCCTTGAGA TGATAACTCA
  R
  AGAAGAGCTG GATATGTGCT CATGTGTTTC CAAACATCTC CAACCATTCA TTAAATCCTC
  CCTTGGAGAG GAGACAGCAA TGGCCCAGAG TGGGGTTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320569694	CHEV_2_154016843	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263458256					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154033027 () rs orientation: forward

Symbol	Name	Function Class
Bpifb1	BPI fold containing family B, member 1	Intron
Rr567774	regulatory region 567774	279 bp distal
Rr567775	regulatory region 567775	73 bp distal
Rr567776	regulatory region 567776	31 bp distal
Rr567777	regulatory region 567777	1083 bp proximal
Tssr20971	transcription start site region 20971	348 bp downstream
Tssr20972	transcription start site region 20972	339 bp downstream
Tssr20973	transcription start site region 20973	325 bp downstream
Tssr20974	transcription start site region 20974	275 bp downstream
Tssr20975	transcription start site region 20975	250 bp downstream
Tssr20976	transcription start site region 20976	161 bp upstream