rs263459405 SNP Detail

Summary

• ID
  rs263459405
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:104223669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAA GCTACAAGAA AAAATCCCCC
  Y
  CCCCAAGAAA AGCCCCCAAA ACAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321240839	CHEV_4_104039077	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263459405					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104223669 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14517	CpG island 14517	158 bp proximal
Dab1	disabled 1	within coordinates
Rr376948	regulatory region 376948	1455 bp upstream
Rr596451	regulatory region 596451	545 bp proximal
Rr596452	regulatory region 596452	628 bp proximal
Rr596453	regulatory region 596453	1129 bp proximal
Tssr38124	transcription start site region 38124	858 bp upstream
Tssr38125	transcription start site region 38125	1077 bp upstream
Tssr38126	transcription start site region 38126	1121 bp upstream
Tssr38127	transcription start site region 38127	1156 bp upstream
Tssr38128	transcription start site region 38128	1167 bp upstream