rs263515773 SNP Detail

Summary

• ID
  rs263515773
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128203546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTAGATAC CCAGAGGTAT
  GTCTTGAGAC CTTGGCTCAA ACAACAATAA CAAAAAGCTG TGACTTAATT AAGTCCTGTA
  ATAAGTGGTT TCTTAGCATG TTCAATCCCC AGCACTGCAG AAAAACAGCA GCATGGTGGC
  ACATGTCTAT AATCTCAGCT CTAGGGAGGT AGGTGGAGGC AAGATATAAG TTCAAAGTCT
  Y
  CTTGACTGTA TATCAAGTTC AAGGCCAACC CTAGGCTATG TGAGAGCCTG TCTCAAAATG
  TGTGTGTGTG AGATACCTAT GATGCAGCTC TGGCTATGTA GTCCGTGGAA GCTTCAAGCT
  TAGATTACAG GCTGTACTAC CTAGTCGGTT ACCTTTCTAT GATGTAACAC AATTCTAGAC
  TAATACACGT GCAGAACAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323533357	CHEV_10_127804733	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263515773					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128203546 () rs orientation: forward

Symbol	Name	Function Class
Coq10a	coenzyme Q10A	within coordinates
Cpgi2395	CpG island 2395	406 bp proximal
Rr224459	regulatory region 224459	within coordinates
Rr369103	regulatory region 369103	1284 bp upstream
Tssr99854	transcription start site region 99854	999 bp downstream
Tssr99855	transcription start site region 99855	1213 bp downstream
Tssr99856	transcription start site region 99856	1266 bp downstream
Tssr99857	transcription start site region 99857	1405 bp downstream
Tssr99858	transcription start site region 99858	1445 bp downstream