rs263529143 SNP Detail

Summary

• ID
  rs263529143
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:79192639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTCTGAT TTCCCTCAGT
  GATAGACTGT GACCTGAGAT GTGTATGCCA AATACTTTCT TCTCCAAGTT GATTTTAGTC
  ACGGTGTTTA CCACAGCAGA CAAACAGACC AGACCAGTTC TCAGTGTCTT CAGCATGTTG
  TCATAGTTGT CTCCTTCTTG GCTGTAGTTT CTTTTTTTTT CTTTTTTTCT AGTTGACTAG
  A
  TCTCCTGTGC ATCGTTTTAT AATTATTTCT TAACAGTGCA CTGATCAAAA GGTTCATAAT
  TTTTTTTAGC TAAGGTATAT CTTTTGAGAA AGAATAGTTT TGCTTCTAAT ACCCATTTTT
  ATTGATGATT AAGGTTGGTC TGTTGGCCTT ATGCTTTGAT GTTTCAAGTT AAGACTTCTC
  ATCTTTGTAT TCTTTCCAAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324108060	CHEV_12_80246852	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263529143					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:79192639 () rs orientation: forward

Symbol	Name	Function Class
Arg2	arginase type II	within coordinates
Gm40462	predicted gene, 40462	within coordinates
Tssr114084	transcription start site region 114084	8 bp downstream