rs263598626 SNP Detail

Summary

• ID
  rs263598626
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83106410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTTAAATAT GGACCTGTCA TTCTGATAAA GACTTGTGTG
  GAGAAAACTT GAAAAACTAG ATCTGAATTG TTTTTTTTTT TTTAAAACAT TCCTAAAGTC
  R
  TCAGTTCCCC ACAATATAAT TGACACCCAT GTTGACTGTA ACTCTCATAA TAAATCAAAG
  CAAATAGGAC ATCAAAGATA ACTGTGGGCT TCATTACAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322735869	CHEV_8_84903680	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263598626					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83106410 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Tssr81957	transcription start site region 81957			716 bp upstream
Tssr81958	transcription start site region 81958			700 bp upstream
Tssr81959	transcription start site region 81959			299 bp downstream
Tssr81960	transcription start site region 81960			484 bp downstream
Tssr81961	transcription start site region 81961			520 bp downstream