rs263762157 SNP Detail

Summary

• ID
  rs263762157
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:10289867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGCAATT TTCCAAGCTT
  CTTACCTTCA GTCTCAACTC CTCCCCAGTT ACCTAGCAAC AGTAAAGAAT GAATATAAGG
  GTGGCTGCTT GGCTCCACCT TGCTCTCTTA CTTGTCTCTC TCTTACTTCT TGCTCTCACC
  CTCTCTCCTC TCTGTCTTCT CCTCCCCTCT CTCCTCTCAT CTCACTCTCT CCTTCTTACT
  M
  TCTCTTTCTC TTTAGCCTTC CCCCATCTCT CTCTCTTGCT CTCTCTCTCG CTCCCTTCTA
  TCTTTCCCAT TCCTTTCTAT AATAAAGCTC TAAAATCATA GATTGTCTCT GTTCATCAAG
  ACTGTGCTCA CTCTCAATAG ACTGGGAACC TCTCTTTCCT CATCCCTCTC TCCCATAACC
  CCAGGGCTTT TGAGAGTAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321472801	CHEV_5_10239900	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263762157					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:10289867 () rs orientation: forward

Symbol	Name	Function Class
Speer1c	spermatogenesis associated glutamate (E)-rich protein 1C	1846 bp downstream