rs263775302 SNP Detail

Summary

• ID
  rs263775302
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:165316628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcagcaggt gaaggcacct ccaggcctgg
  tgacctgagt ttggtccctg ggacccacca tagaagaaga acaaagattc ctgtaaattg
  tcctctgacc accacacacA AGTATGCATt ctctctctct ctctccctct ctctctctct
  Y
  cctctctctc tccctctctc tcATAATAAA ATAAAAGCTA CACAagaaag agaggggaaa
  agggaagggg gcagagagaa agggagggaC CACTGTGCTA ACGTCTCCCA CAGTTCCACT
  AACAAACTCC CATGGTTTTT ATCACGGTTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608163	CHEV_2_165300208	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263775302					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165316628 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12708	CpG island 12708	1029 bp distal
Rr569927	regulatory region 569927	1587 bp distal
Rr569928	regulatory region 569928	1244 bp distal
Slc13a3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	1511 bp upstream
Tssr27627	transcription start site region 27627	1506 bp upstream