rs263786109 SNP Detail

Summary

• ID
  rs263786109
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39369327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGTGGGTC AGGGTGACTT
  TCTTTGAATG AATACTCCTT GAACCCAGGA AGTGGGTGGG TGGAGGGATG CACTATCTGC
  TTTATGATTA GCATACCTTG GAGCATTGAG TCACAAAGGC CATTCCCAAG CCTGGGCCTA
  AAGGCCTAGA ATTTTGTTTT TACGTTTTAC TTTTTCAGTT TTACCTAGAA ATTGTATACC
  Y
  TATGAAGAGG CCAATTTGGA GACCAAGATT TTGGTGAGAT TTTTGCTACA TCTTTTCCAG
  TGCCTATTAA AATTTCAGTT TCAATATTAT TTACAAATAT CTTTATCTTT GGCCTCTGAT
  CATCTATAGA GAGAATTTCT TGTGTACTGT ATGGATTCAG CACCTGTCAA GAAATGCTTA
  TTGGCCTATA TGCTTAGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228524	CHEV_2_39334835	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263786109					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39369327 () rs orientation: forward

Symbol	Name	Function Class
Rr373076	regulatory region 373076	within coordinates