rs263834173 SNP Detail

Summary

• ID
  rs263834173
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:42064269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGTTGAC ATTTTTATTT
  TATTGCTTTG CATTGCCGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG CTGGGGATGG
  AACCAAAGAG CTCATGCATG AGAGAAAAGC TGCCTACACC TGGATGCCTC CAGCTGAAAC
  CTTAACCCAC AGTGGTAAGG AGTTAGGGCA CTAGGCCTTT GGGAAGGAAT TTATTTACAT
  W
  TTTTTTTTTT TTTTTTTTTG GTTTTTCGAG ACAGGGTTTC TCTGTATAGC TCTGGCTGTC
  CGGGAACTCA CTTTGTAGAC CAAGCTGGCC TCAAACTCAG AAATCCGCCT GCCTTTGCCT
  CCCAAGTGCT GGGATTAAAG GCGTGCGCCA CCACGCCCAG ATGTTTACAT AATTCTATAA
  ACTCGGCCAT GGAATCTGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325596235	CHEV_18_42090858	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263834173					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:42064269 () rs orientation: forward

Symbol	Name	Function Class
D18Mit104	DNA segment, Chr 18, Massachusetts Institute of Technology 104	1315 bp proximal
Prelid2	PRELI domain containing 2	Intron