rs263836767 SNP Detail

Summary

• ID
  rs263836767
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:137639294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCTGCTGT CCTTCACGCA
  CTTCTGGAAC AGCCTTAGGG GTAGAGGTTG GGGGCTCTGG GCCCCAACTA CCATCGGACC
  TGTCCTGGGA GCAGATGACA CCTGGGCCCA GCCAATTAAC AAGGACTTGG TGACCATGGT
  CTTGTGTGTA GCACTGGCCT TGGATATCCC CCTGCCCTTA GGCTGCTTCG GGTACAGCCC
  Y
  CATCTGGGTG AAGAGCGTTG TGTCAAACAC AATAAAAAGA AGCCCAAAGG CCTGTAGGTT
  GGTCCTCAGG TGTGTGCCTG CCTGTCCATG AATGCGCGAG CTTTTTGGGG ACCTGAGTCC
  TCTACTGTGA GTCCCAGTGT AGACTGCTAT ATTTCTGTGC CTGGCAGAGG AGCTTTACCG
  GCACAAGTGC CCCGTGCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321702664	CHEV_5_138082260	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263836767					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:137639294 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16844	CpG island 16844	83 bp proximal
Gm20605	predicted gene 20605	within coordinates
Irs3	insulin receptor substrate 3	2000 bp downstream
Lrch4	leucine-rich repeats and calponin homology (CH) domain containing 4	within coordinates
Sap25	sin3 associated polypeptide	441 bp upstream
Tssr49364	transcription start site region 49364	244 bp upstream