rs263884025 SNP Detail

Summary

• ID
  rs263884025
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113096513 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTCTACCC CCAGACTCGA GAAGACCGAA
  AGGTTGAAGC CATCATGCAT GCTTTTGAAT CTTTAGAGAA GAGAAAGAAA CGGCGGGATC
  AGCCTGTAGA ACAGAGCAGC TCGGACATAG AGATTACTAC TAGCAGTTCA GAGATAGTAG
  Y
  TGGAGAAGAG ACAAAAACTG CAGCCCCTGA GTCTGAAGTT AGCAGCCCTG TTTCAAATGT
  TGCTATCCCA AGCACCCCAC AGAGCACTGG TGTGAATACT CGGAGGTCCT CCCATGCTGG
  GGTAAGAGGG AAAGCTCTGA AAAGTCCTGC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321909840	CHEV_6_113069546	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263884025					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113096513 () rs orientation: forward

Symbol	Name	Function Class
Setd5	SET domain containing 5	within coordinates
Tssr58173	transcription start site region 58173	1422 bp upstream