rs263890402 SNP Detail

Summary

• ID
  rs263890402
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97022281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAGAACAG TGACAGGAGC
  TGGGGCTGGG CTAATCATGG ACAAGAGGCT TCCTGGAGAA TGTGGTTGGC AATCATGGAG
  TCTGTTTTAT TTGCATAATT CCTCACCAGA GACAGAACTA TGCAACCAAA TTAAACTTTG
  GCTTCTTTCT TCCTTTTTGA TGGGGGTCTT CTCTTGTAGC ATAGGCTAGC CCCTAACTCA
  C
  AATCCTTCTG CCTTAGCCTC CTTAATAGCT GGGATTAGGG GTATGTGCTA ATAATGTCTG
  GCTCTCACCT TTCCTTGCAG ACTACTGTTG TATCTCCAGT GTAGCCATTG CTGCTGCAGC
  TGCTACTGCT GAGCTCGCAT GCCTGGGTTT AGGGTGTGCA CACCTATCAA GGCCGAATAG
  GGAAACTCTG GAATGGGAGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116063	CHEV_9_97040647	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263890402					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97022281 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	855 bp upstream
Rr685156	regulatory region 685156	44 bp proximal
Tssr86631	transcription start site region 86631	885 bp upstream