rs263898797 SNP Detail

Summary

• ID
  rs263898797
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:160941689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    attaatggt ggacaatttg cctaggatat
  gcaatgttca aggtttaatt ccccagcaat gcctttctcc ctaatgaaat tatataaaaa
  gttgagcatc atgagcaggc ctataatcct agcacaggga acatggaggg aagaagatca
  R
  aacttcaagg tcttgtctca aaatatacca acctccctca aaaaaaaaaa aAAAGACTCA
  AATTTTCAAA AAATACttaa tgttatttta gatgtctatg tgtgcctgag cgtcagcatg
  tgaaccatgt gtgggtactc aagaaacccg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320080352	CHEV_1_163044250	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs263898797					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160941689 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Klhl20	kelch-like 20			Intron
				Noncoding-Transcript-Variant
Rr421756	regulatory region 421756			570 bp proximal